Course Schedule
2024 Course Schedule
The 2025 Computational Genomics Course will be held June 23-27. The 2025 course will be similar to the 2024 schedule below. The 2025 schedule will be posted once finalized.
Please familiarize yourself with the applications we will be using in this course on the Course Preparation & FAQs page.
Classes are held from 8:30 AM to 5:00 PM (central time). 15-minute breaks will be given daily at 10:00 AM and 2:45 PM between the lectures and computer labs.
Live content
| 8:30 – 10 AM | 10:15 AM – 12:15 PM | 12:15 PM | 1:15 – 2:45 PM | 3 – 5 PM | |
|---|---|---|---|---|---|
| 6/24 MON |
Welcome & Intro Genome Assembly |
Lab Introduction Genome Assembly Lab |
Lunch | Polymorphisms & Association Tests Alex Lipka pdf | pptx (lecture) |
Polymorphisms & Association Tests Lab (synchronous) |
| 6/25 TUE |
Clinical Variant Interpretation Joe Farris (lecture) |
Clinical Variant Interpretation Lab Joe Farris (synchronous) |
Lunch | Bulk RNA-Sequencing Analyses Jessica Holmes (lecture) |
Bulk RNA-Sequencing Analyses Lab (self-paced) |
| 6/26 WED |
RNA-Seq in Hereditary Disease Diagnosis Collin Osborne (lecture & lab) |
Microbiome Bionformatics Lu Yang, Jun Chen (lecture) |
Lunch | Basic Single Cell & Spatial Transcriptomics Jenny Drnevich (lecture) |
Basic Single Cell & Spatial Transcriptomics Lab (self-paced) |
| 6/27 THU |
Clinical Single Cell & Spatial Transcriptomics Yan Asmann (lecture) |
Clinical Single Cell & Spatial Transcriptomics Lab (self-paced) |
Lunch | Regulatory Genomics Charles Blatti (lecture) |
Regulatory Genomics Lab (self-paced) |
| 6/28 FRI |
Exploring AI Priyam Mazumdar (lecture) |
Exploring AI Lab Priyam Mazumdar (synchronous) |
Lunch | Clinical Applications of AI Irbaz Riaz, YooJung Choi, Kenneth Kehl (lecture) |
Clinical Applications of AI Lab |
On-demand content
| Variant Calling Chris Fields (lecture) |
Systems Biology Charles Blatti (lecture) |